27 September, 2012 (09:02) | What's the Answer? | By: Mary
BioStar is a site for asking, answering and discussing bioinformatics questions. We are members of thecommunity and find it very useful. Often questions and answers arise at BioStar that are germane to our readers (end users of genomics resources). Every Thursday we will be highlighting one of those questions and answers here in this thread. [...]
Tags: bacteriophage, phage, phiGENOME, visualization
13 June, 2012 (09:00) | Tip of the Week | By: Trey
Well, not that kind of galaxy (though visualizing those are quite nice), this kind of Galaxy. Galaxy is an excellent tool to analyze, reproduce and share genomics data and the Galaxy folks are always updating, improving and adding features to the tool. We have a tutorial for Galaxy to help you get started using this tool. As you [...]
Tags: analysis, galaxy, genome visualization, Tip of the Week, tools, visualization
Comments: 1
4 June, 2012 (18:19) | Genomics Research | By: Mary
This announcement came across the Cytoscape mailing list today. Ah, if I were young again I’d do a project on this–I love to think about how to display and interact with the bonanza of data we’ve got rolling in. Announcement below, with links to the conference embedded. You can see the original on the Cytoscape [...]
Tags: visualization
11 April, 2012 (09:25) | Tip of the Week | By: Mary
In this era of big data and computational tools, it’s easy to generate huge amounts of texty and statistical data that offers great insights into biology, and delivers leads to design experiments in actual organisms and cells. But the cell and developmental biologist in me still yearns for great visualization tools to explore the results, [...]
Tags: c. elegans, visualization, wormbase
Comments: 2
15 March, 2012 (08:08) | What's the Answer? | By: Mary
BioStar is a site for asking, answering and discussing bioinformatics questions. We are members of thecommunity and find it very useful. Often questions and answers arise at BioStar that are germane to our readers (end users of genomics resources). Every Thursday we will be highlighting one of those questions and answers here in this thread. [...]
Tags: r, visualization, VIZBI
24 February, 2011 (09:00) | What's the Answer? | By: Trey
BioStar is a site for asking, answering and discussing bioinformatics questions. We are members of the community and find it very useful. Often questions and answers arise at BioStar that are germane to our readers (end users of genomics resources). Every Thursday we will be highlighting one of those questions and answers here in this [...]
Tags: bam, IGB, Next Generation Sequencing, NGS, UCSC Genome Browser, visualization
3 March, 2010 (08:45) | Genomics Research, Genomics Resource News, Tip of the Week | By: Mary
Recently while watching the #bioinformatics tag on Twitter I saw Khader Shameer mention Caleydo. I was instantly hooked at the very clever visualization strategy that they are using to provide more surface area for examining the data you are interested in viewing. Their specific topics are pathways and gene expression, but it got me thinking [...]
Tags: BioCarta, Gene Expression, KEGG, pathways, systems biology, visualization
Comments: 1
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