16 May, 2012 (09:31) | Tip of the Week | By: Mary
Recently when I was adding videos to our SciVee collection, I noticed that there was a set of new videos about BindingDB. This database has been around for a long time, and I was surprised to realize that we hadn’t covered it yet. And it certainly only grows more important to understand proteins and their [...]
Tags: drug discovery, drug targets, interactions, protein interactions
28 December, 2011 (08:24) | Tip of the Week | By: Mary
As you may know, we’ve been doing these video tips-of-the-week for FOUR years now. We have completed around 200 little tidbit introductions to various resources. At the end of the year we’ve established a sort of holiday tradition: we are doing a summary post to collect them all. If you have missed any of them [...]
Tags: epigenetics, interactions, OMIM, promoters, RCSB PDB, snps, Taverna, UCSC Genome Browser
Comments: 1
1 September, 2011 (08:30) | What's the Answer? | By: Mary
BioStar is a site for asking, answering and discussing bioinformatics questions. We are members of the community and find it very useful. Often questions and answers arise at BioStar that are germane to our readers (end users of genomics resources). Every Thursday we will be highlighting one of those questions and answers here in this [...]
Tags: Cytoscape, Cytoscape plugin, interactions
7 April, 2011 (09:30) | What's the Answer? | By: Trey
BioStar is a site for asking, answering and discussing bioinformatics question s. We are members of the community and find it very useful. Often questions and answers arise at BioStar that are germane to our readers (end users of genomics resources). Every Thursday we will be highlighting one of those questions and answers here in [...]
Tags: gene, gene interactions, interactions, protein interactions
31 March, 2011 (09:10) | What's the Answer? | By: Mary
BioStar is a site for asking, answering and discussing bioinformatics questions. We are members of the community and find it very useful. Often questions and answers arise at BioStar that are germane to our readers (end users of genomics resources). Every Thursday we will be highlighting one of those questions and answers here in this [...]
Tags: cell modeling, interactions
26 January, 2011 (09:15) | Genomics Research, Genomics Resource News, Tip of the Week | By: Mary
For this week’s tip of the week I’m going to introduce iRefWeb, a resource that provides thousands of data points on protein-protein interactions. If you follow this blog regularly, you may remember that we had a guest post from the iRefWeb team not too long ago. It was a nice overview of many of the [...]
Tags: IntAct, interactions, iRefWeb, MINT, protein interactions
Comments: 2
17 January, 2011 (10:09) | Genomics Resource News | By: Mary
We were on the road last week doing workshops, so this is a few days old now. But if you aren’t on the GO Friends mailing list it’s possible it’s new for you. A quick word about GO Friends list: because so many tools rely on Gene Ontology and have some kind of GO components, [...]
Tags: interactions, pathways, Reactome
Comments: 3
13 January, 2011 (09:01) | General Science | By: Trey
Our “What’s Your Problem” post will be transitioning to a “What’s the Answer” post this week and going forward. BioStar is a site for asking, answering and discussing bioinformatics questions. We are members of the community and find it very useful. Often questions and answers arise at BioStar that are germane to our readers (end [...]
Tags: biostar, interactions, ontology, protein, protein interactions
Comments: 2
16 November, 2010 (09:07) | Genomics Research, Genomics Resource News, Guest Posts | By: Mary
This next post in our continuing semi-regular Guest Post series is from Andrei Turinsky, one of the developers of iRefWeb. If you are a provider of a free, publicly available genomics tool, database or resource and would like to convey something to users on our guest post feature, please feel free to contact us at [...]
Tags: Cytoscape, interactions, iRefWeb, protein analysis
Comments: 3
6 August, 2010 (09:13) | SNPpets | By: Mary
Welcome to our Friday feature link collection: SNPpets. During the week we come across a lot of links and reads that we think are interesting, but don’t make it to a blog post. Here they are for your enjoyment… MetNetMaker: a software tool for making Metabolic Network and pathway representations. [Mary] Genome Workbench v2.1.1 release [...]
Tags: BioTorrents, interactions, NCBI, pathways
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