Recently, the Broad Institute announced a new tool: GenomeSpace. When I first looked at it, admittedly a very cursory look, I wasn’t sure how it would be much different than an integrator of tools like Galaxy or GenePattern. Obviously that cursory look was wrong at first glance since both Galaxy and GenePattern are in their list of [...]
Recently many of the bioinformatics tweeps I follow were excited about the tool called VarSifter. Here’s the notice that I saw: RT @yokofakun: http://www.youtube.com/watch?v=I7azpqTWFuM Jamie Teer describes VarSifter, an interactive GUI tool for handing/quering/filtering VCFs #ngs I just had a chance to watch the video, and now I can see why they were impressed! Over [...]
Welcome to our Friday feature link collection: SNPpets. During the week we come across a lot of links and reads that we think are interesting, but don’t make it to a blog post. Here they are for your enjoyment… TCGA = The Cancer Genome Atlas: RT @ewanbirney: RT @genome_gov: TCGA data will now flow to [...]
Recently I’ve been coming across more and more requests and need for genome annotation and visualization software. Genomes are being completed left and right and researchers need ways to browse and annotate these genomes. There are a lot of tools out there. This post is a quick attempt to start listing those. It is not [...]
I haven’t had time to check it out, but I wanted to pass it along to those of you who might want to investigate over the holidays. I’m delighted to see that the Integrative Genomics Viewer team has added the support for uploading your own genomes and aren’t restricted to the initial ones that were [...]
From the Genome-Technology mailing list I found about about this software release from the Broad Institute: Broad Institute Makes Genomics Data Viewer Public By a GenomeWeb staff reporter NEW YORK (GenomeWeb News) – The Broad Institute of MIT and Harvard has created a genomics informatics tool that will allow researchers to visualize genomic information, and [...]
Recent Comments