Another Wiki, WikiPathways

ResearchBlogging.orgPLoS Biology reports today on WikiPathway. The paper entitled “WikiPathways: Pathway editing for the people,” announces a new wiki for the ‘public curation’ of pathway data. The authors argue that

 The exponential growth of diverse types of biological data presents the research community with an unprecedented challenge to keep the flood of biological data as accessible, up-to-date, and integrated as possible.

I agree with this. We’ve seen it here and mentioned it many times, the growth of data is exponential and difficult to keep track of. The proposed solution for pathway data, as there has been for other data types and curation that I’ve written about lately, is a wiki: WikiPathways to be exact. The authors have high hopes for this wiki, as they state:

WikiPathways will be a powerful resource for the research community and a vital forum for pathway curation, And we are hopeful that it will serve as an example for how the continuing flood of biological data can be managed and utilized by the community to irrigate future hypotheses and discoveries

I’ve already made known my “skeptical optimism” for wikis for biological data known in a previous post, reading this later paper, that would still apply here. But right now I’m not going to write beyond that, I’m just going to point you to this paper and wiki. Later (this week, next at the latest) I’ll be critiquing this paper more fully and more generally look at this trend currently to use wikis for community curation and documentation of biological data and databases.

Pico, A.R., Kelder, T., van Iersel, M.P., Hanspers, K., Conklin, B.R., Evelo, C. (2008). WikiPathways: Pathway Editing for the People. PLoS Biology, 6(7), e184. DOI: 10.1371/journal.pbio.0060184