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What’s the Answer? (NGS tools you are using the most)

reddit_iconThere are a lot of tools in the bioinformatics ecosystem. Some of them you won’t ever need because of your particular research focus.  For some of them you may want to know about similar alternatives. But my favorite types of discussions with practitioners of various sorts is what are they actually using. This week’s highlighted question asks that of folks working with NGS data.

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Those working with NGS data – what is your list of most used tools?

submitted  by lc929

Command line, Galaxy browser? Sam tools? Thanks.

It’s really great to know what’s actually in use and working for people. Go have a look at the answers. Contribute some thoughts over there as well if you have favorites.