What’s the Answer? (which genetic code)

This week’s highlighted question is a kind of a basic one, but as more and more sequence data comes along from species that people might not have worked with before, it’s kind of a handy tip to keep in your back pocket.


Biostars is a site for asking, answering and discussing bioinformatics questions and issues. We are members of the Biostars_logo community and find it very useful. Often questions and answers arise at Biostars that are germane to our readers (end users of genomics resources). Every Thursday we will be highlighting one of those items or discussions here in this thread. You can ask questions in this thread, or you can always join in at Biostars.


Question: Database that says what genetic code a particular organism uses?

I’m at ftp://ftp.ncbi.nih.gov/entrez/misc/data/gc.prt with all the genetic codes.  Trying to figure out what genetic code Nostoc punctiforme uses.  Is there a database that has which version they use? I know it’s not standard and they have multiple start codons.

jolespin

The very helpful response from h.mon described where to find it on the NCBI Taxonomy pages and the link to the details. Go click through.