作者归档: 玛丽

SNPpets_2

星期五SNPpets

This week we’ve got DNA in the gig economy and for sports fans (?), new software resources for virus and lipids, a handy collection of cancer genomics papers, microbiomes, biosecurity, 羊, pearl millet, and de-extinction. My favorite read this week, 虽然, was the mosquito and gene drive review paper. I am so on board to gene-drive those things….


SNPpets_2欢迎来到我们的链接集合星期五功能: SNPpets. 一周之内,我们遇到了很多链接和读取,我们认为很有趣, 但不要到一个博客帖子. 在这里,他们是您的享受…


And why I want gene drive mosquitoes:

SNPpets_2

星期五SNPpets

This week I left the “call to action” tweet at the top–you could vote for GenBank every day until the end of the competition. Today’s the last day. Vote once more. And remember how resources like GenBank let us have foundations for other important resources as well. There are new resources in this week’s SNPpets that are definitely descendants of GenBank. 还, more tit-for-tat on the Venter paper privacy issue drama. A very personal genome story from a personal genome researcher. Makes you think about the policy issues in new ways. 还, policy on gene editing in plants. The first species to have every members’ 基因组数据. Gene counts via RNAseq in a new resource, and a new cancer gene repository.


SNPpets_2欢迎来到我们的链接集合星期五功能: SNPpets. 一周之内,我们遇到了很多链接和读取,我们认为很有趣, 但不要到一个博客帖子. 在这里,他们是您的享受…


SNPpets_2

星期五SNPpets

This week I left the “call to action” tweet at the top–you could vote for GenBank every day until the end of the competition. On other fronts, there’s big media on Venter’s DNA re-identification article–but there’s also significant blowback on that. A series of tweets in there gets to that. Otherwise, 更多的其他很酷的事情在周围可用的工具基因组学和周围的其他物种,,en,高兴地宣布,我们汇集CRISPR屏幕设计工具,,en,GUIDES,,en,现已发布,,en,pic.twitter.com/q3AYw9gTUW,,en,内维尔桑姜纳,,en,@nevillesanjana,,en,twitter.com/david_a_knowles/status/905203427931602944,,en,在所有的鹅基因组杂交测定基因组学和形态的历史与渗入,,en,鸟类学,,en,pic.twitter.com/cxDPXg1ZAe,,en,Ornithomics,,en,@ornithomics,,en,采用全基因组的个体的鉴定特征预测,,en,pic.twitter.com/JCKesjsAC2,,en,TeselaGen生物技术,,en,实际上,我在本文的作者,这是我离开挡拆的原因之一,,en,的来这里的目的是为了防止信息共享,,en,杰森·派珀,,en,@piper_jason,,en,预印本重塑生物学出版,,en,纸在PNAS,,en,通过揭穿,,en,在bioRxiv前,,en,twitter.com/clairemcwhite/status/905445932094939136,,en.


SNPpets_2欢迎来到我们的链接集合星期五功能: SNPpets. 一周之内,我们遇到了很多链接和读取,我们认为很有趣, 但不要到一个博客帖子. 在这里,他们是您的享受…


通过https://twitter.com/david_a_knowles/status/905203427931602944

通过https://twitter.com/clairemcwhite/status/905445932094939136

 

SNPpets_2

星期五SNPpets

This week I left the “call to action” tweet at the top–你可以 vote for GenBank every day in August. And I know it’s September now, but I wanted to go and check–and they made it to the final four! So go vote for GenBank some more. Same link works fine. Other things this week: NYTimes shows more stories of people whose recreational genomics endeavors reveal family secrets. One of them is what’s in the reference genome? I don’t think the answer came up completely clearly, but it reminds me I want to look into that again. The breakthrough cancer diagnostics kit is approved. The girlfriend meme. And one more example of how far ahead agriculture is on genomics.


SNPpets_2欢迎来到我们的链接集合星期五功能: SNPpets. 一周之内,我们遇到了很多链接和读取,我们认为很有趣, 但不要到一个博客帖子. 在这里,他们是您的享受…


This seems to be the answer:

SNPpets_2

星期五SNPpets

This week I left the “call to action” tweet at the top–你可以在八月每天投给基因库,,en,切割即将到来,,en,所以要再次投票,,en,其他,,en,在本周其他新闻,,en,关于大数据的故事跨越了时间和空间的评估生物多样性,,en,和一个大照片,,en,在初级保健全基因组测序,,en. The cut is coming soon, so go vote again. In other news this week, a story about big data for assessing biodiversity across time and space. And a Big Photo. Whole-genome sequencing in primary care–not ready yet. #CRISPR ethics–not ready yet. Animal breeding, plant bioinformatics, and horizontal gene transfer round out the week.


SNPpets_2欢迎来到我们的链接集合星期五功能: SNPpets. 一周之内,我们遇到了很多链接和读取,我们认为很有趣, 但不要到一个博客帖子. 在这里,他们是您的享受…


通过https://twitter.com/FloridaMuseum/status/898293371814330368

SNPpets_2

星期五SNPpets

This week I left the “call to action” tweet at the top–you can vote for GenBank every day. But the other tweets are new this week. 第一, don’t fall for the fake grant scam. A catalog of museum samples (I love the data from sequencing projects using those), genotyping arrays vs. sequencing debate and a lot of new data that’s been released, fungi and é. 大肠杆菌 数据, a terrible DNA joke, and a terrible use of DNA testing to see how white a White Nationalist is.


SNPpets_2欢迎来到我们的链接集合星期五功能: SNPpets. 一周之内,我们遇到了很多链接和读取,我们认为很有趣, 但不要到一个博客帖子. 在这里,他们是您的享受…


通过https://twitter.com/surt_lab/status/897187105495019520

SNPpets_2

星期五SNPpets

本星期在鸣叫行动的实际通话,,en,见史蒂文·萨尔茨堡的有关鸣叫,,en,服务于美国获奖,,en,您可以投票选出基因库,,en,试着想象,,en,试着想象一下在过去的几十年中没有它,,en,而且这一次在公众面前庆祝政府科学,,en,进入投票,,en,回来,,en. See Steven Salzberg’s tweet about the 2017 Service to America award and GenBank is nominated–you can vote every day! The rest of the week’s intriguing tweets include yeast diversity, British historical diversity, non-coding regulatory stuff, computer-coding DNA hackers, and setting standards for information of uncultured samples of organisms and for personal data.


SNPpets_2欢迎来到我们的链接集合星期五功能: SNPpets. 一周之内,我们遇到了很多链接和读取,我们认为很有趣, 但不要到一个博客帖子. 在这里,他们是您的享受…


SNPpets_2

星期五SNPpets

本星期在鸣叫行动的实际通话,,en,见史蒂文·萨尔茨堡的有关鸣叫,,en,服务于美国获奖,,en,您可以投票选出基因库,,en,试着想象,,en,试着想象一下在过去的几十年中没有它,,en,而且这一次在公众面前庆祝政府科学,,en,进入投票,,en,回来,,en. See Steven Salzberg’s tweet about the 2017 Service to America award. You can vote for Genbank. 真的–try to imagine the last couple of decades without it. And it’s time to celebrate government science in front of the public. Go vote. 之后,, come back for the cheese and pomegranite genome. Most intriguing chatter this week was the ancient plant genome stuff at the bottom. I keep trying to tell people how far ahead agriculture is in genomics applications. Human researchers: ZZZZzzzzzzzzz.


SNPpets_2欢迎来到我们的链接集合星期五功能: SNPpets. 一周之内,我们遇到了很多链接和读取,我们认为很有趣, 但不要到一个博客帖子. 在这里,他们是您的享受…


SNPpets_2

星期五SNPpets

我昨晚熬夜看我不得不保健今天上午,,en,我下车时间表,,en,但是,我们出发,,en,还是保险,,en,这包括周五有史以来第一次缓步,,en,这包括周五有史以来第一次缓步动物蛋白结构,,en,这是更大的在里面,,en,等待,,en,说错话,,en,人WISE,,en,我们的娱乐基因组学应用,,en,而我们的娱乐基因组学的后果,,en,后生洗发水,,en, and I got off schedule. But off we go–still insured!

This Friday includes the first ever tardigrade protein structure! It’s bigger on the inside–wait, 在, wrong thing. Human wise, we have recreational genomics apps, and we have recreational genomics consequences. Epigenetic shampoo (严重). Students and biotechnology issues, how are they thinking about the topics? Maize and Mars. Dead bovine DNA. Live cheese microbes. Hungry yet?


SNPpets_2欢迎来到我们的链接集合星期五功能: SNPpets. 一周之内,我们遇到了很多链接和读取,我们认为很有趣, 但不要到一个博客帖子. 在这里,他们是您的享受…


SNPpets_2

星期五SNPpets

这个星期我采取了不同的策略,,en,有什么烦心事我关于基因组学的滥用,,en,我要去要强调对,,en,最近有朋友指出我的东西,我从来没有见过,,en,曲柄在不当使用数据的23andMe公司型到,,en,诊断,,en,孩子们为可能遭受,,en,疫苗伤害,,en,正如你可能从狗哨认识,,en,这意味着抗疫苗曲柄正在他们的消息,一个新的前,,en,他们被滥用的数据来说服家长接种他们的孩子是危险的,,en,这是一个非常,,en,作为疫苗的担忧已经导致了悲剧性的结果为孩子在利率上升得到疫苗可预防疾病非常令人不安的方向,,en,曲柄围绕走到一起,,en,在球场的可怕想法的人拿去卖,,en,排毒,,en,药水和补充,,en. There was something bothering me about misuse of genomics, and I’m going to rant on that. Recently a friend pointed me to something that I hadn’t seen before: cranks are misusing 23andMe-type of data to “diagnose” kids as being likely to suffer “vaccine injury”. As you might recognize from the dog-whistle, this means that anti-vaccine cranks are taking their message to a new front: 个性化基因组学. They are misusing data to convince parents that vaccinating their kids is dangerous.

This is a very, very disturbing direction as vaccine fears already have led to tragic outcomes as kids get vaccine-preventable diseases at increasing rates.

此外, cranks are coming together around “个性化医疗” to pitch their terrible ideas to people and sell them “detox” potions and supplements. 他们出来说话公众对这些东西,,en,我们需要加强我们的游戏,让人们更好的信息,,en,将有严重后果,,en,基因组学的许多主题滥用,,en,与公共卫生结果的可能性,,en,所以,下面是几个环节来说明这,,en,它的时间,以提高在合法的基因组学社区的这种意识,,en,我希望别人不知道这是怎么回事,,en,通常情况下,,en,这是很清楚,他们正在绘制这些结论,,en,莱拉·凯蒂雷,,ar,@BioChicaGMO,,fr,但是有时,,en,它更微妙的像这样的会议,,en,因此,我敦促,,en,重新考虑参加这次会议,,en,还有的被赋予了很多伪科学在活动平台,,en,本周出现了基因组学上一些主流的通信,以及,,en,我不知道它帮助,,en,pic.twitter.com/zaBEWk86ox,,en,国家DNA日,,en. We need to step up our game and get people better information. There will be serious consequences–misuse of genomics on many topics–with the potential for public health outcomes.

So below are a few links to illustrate this. It’s time to raise awareness of this in the legit genomics community. I expect others didn’t know this was going on, 太.


SNPpets_2欢迎来到我们的链接集合星期五功能: SNPpets. 一周之内,我们遇到了很多链接和读取,我们认为很有趣, 但不要到一个博客帖子. 在这里,他们是您的享受…


This week there was some mainstream communication on genomics as well. I’m not sure it helped. 叹息.